VMD-L Mailing List

From: Jacob Poehlsgaard (mail_lists_at_hardcoil.net)
Date: Thu Oct 26 2006 - 07:00:55 CDT

Hi Rachel

  Just use the "query" mode. Press 0 (zero) with the OpenGL window
active and your cursor should turn into a cross hair. If you then click
on atoms in the OpenGL window, their attributes will be listed in the
VMD log window.

Jacob

Rachel wrote:
> Dear VMD users,
>
> Hi! I am VMD to view the trajectory from AMBER(the *.mdcrd file), from
> the movie, I can see some of the bonds became so stretched (became so
> far away from the protein), which obviously should not happen, however,
> how do I know which bonds are they, which residues they belong to so
> that I can look at them in more details? Thanks a lot for your help.
>
> Best regards,
> Rachel