VMD-L Mailing List
From: Ting Wang (twang_at_ucdavis.edu)
Date: Thu May 11 2006 - 13:47:11 CDT
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Dear VMD users,
It seems there is a bug in the Membrane Plugin.
When the membrane size is larger than 50A x 50A, the commond "membrane -l
popc ..." will generate lipid molecules with serious clash. Some atom-atom
distances are even smaller than 0.2A.Energy minimization can not get over
it, actually minimiztion can not run.
Did anybody else notice this? Can this bug be fixed?
Thank you very much!
Ting
- Next message: Ting Wang: "psfgen for lipid"
- Previous message: Axel Kohlmeyer: "Re: renderman output?"
- Next in thread: Samuel Flores: "high resolution images"
- Reply: Samuel Flores: "high resolution images"
- Reply: John Stone: "Re: bug in membrane plugin"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]