VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Apr 06 2006 - 00:05:04 CDT

Josh,
  I still haven't had time to add this as a feature into VMD 1.8.4, so
it's going to have to wait until after this version is released. In the
mean time, if you want to easily access this kind of data with your own
code, you could either write code and link against the VMD plugin
interfaces, or wait until I have a chance to add a command for this
purpose for you.

  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Mar 02, 2006 at 06:41:23PM -0500, Joshua Speidel wrote:
> Hello,
>
> Is there a tcl or other method to access the volumetric data other than
> Isosurfaces/Volumeslices?
>
> Specifically, I would like to be able to define a volume and calculate the
> mean value of a volumetric data set within that volume. The simplest case
> would be the volume in a spherical shell.
>
> Your help and suggestions are appreciated.
>
> Thank you,
>
> Josh
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078