From: Ioana Cozmuta (
Date: Wed Mar 22 2006 - 23:51:46 CST


Is it possible to set up the NAMD configuration file such that it would
take a selection defined in VMD, update it every step and apply a
harmonic constraint on that selection? What is the correct way of doing
it? Does anybody have an example of such a configuration file?

Thank you,

Ioana Cozmuta, Ph.D
Eloret Corporation
NASA Ames Research Center
Mail Stop 230-3
Moffett Field, CA  94035
phone (650) 604-0993