VMD-L Mailing List

From: syma (syma.khalid_at_bioch.ox.ac.uk)
Date: Mon Oct 10 2005 - 07:13:39 CDT

Hi,

I am (still) trying to get detailed information regarding protein-lipid
contacts. I would like to use the 'within' and 'measure' commands to get
information on all protein-lipid contacts within eg 3 angstroms of each
other. I would also like to get the coordinates of the centre of mass of the
protein and lipids that are involved in each contact.

I would very much appreciate some assistance with this.

Best wishes,

-Syma

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Dr Syma Khalid
Department of Biochemistry,
University of Oxford
South Parks Road,
Oxford
OX1 3QU
U.K.

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