VMD-L Mailing List

From: Samuel Flores (samuel.flores_at_yale.edu)
Date: Sat Oct 01 2005 - 11:42:51 CDT

Can anyone tell me how to pass parameters to a tcl script? I'd like to be
able to issue something like

vmd -dispdev text -e script.tcl x=0

or whatever.. the point is I'd rather not have to modify my program every
time I want to change some parameter.

Many thanks

Sam

-----Original Message-----
From: owner-vmd-l_at_ks.uiuc.edu [mailto:owner-vmd-l_at_ks.uiuc.edu] On Behalf Of
Charles McCallum
Sent: Friday, September 30, 2005 10:15 AM
To: Luis Gracia
Cc: vmd-l_at_ks.uiuc.edu
Subject: Re: vmd-l: RMSD of dihedrals

Hey, that's great, I appreciate it!

Cheers,

Mike
On Sep 29, 2005, at 9:27 PM, Luis Gracia wrote:

> Hi!
>
> I have a tool that can do that with dihedrals in general, I'll try
> to post it tomorrow.
>
> Best,
>
> Luis
>
> Charles McCallum wrote:
>
>
>> Hi there, I was wondering if anyone had a script to calculate RMSD
>> of dihedrals (say, psi and phi, though general would work also),
>> or alternatively, how to use the RMSD menu tool to achieve the
>> same results? I'm hoping to avoid doing it myself, but if I have
>> to...
>> Thanks,
>> Mike
>> --
>> C. Michael McCallum http://chemistry.cop.uop.edu/
>> cmccallum.html
>> Associate Professor Department of
>> Chemistry, UOP mmccallum .at. pacific .dot. edu
>> (209) 946-2636 v / (209) 946-2607 fax
>>
>>
>
>
> 

--
C. Michael McCallum           http://chemistry.cop.uop.edu/ 
cmccallum.html
Associate Professor
Department of Chemistry, UOP
mmccallum .at. pacific .dot. edu                (209) 946-2636 v  /  
(209) 946-2607 fax