VMD-L Mailing List

From: rwiese_at_unr.edu
Date: Wed Jun 08 2005 - 14:04:49 CDT

Quoting John Stone <johns_at_ks.uiuc.edu>:
> Hi,
> Can you send the exact failure message you're getting?
> Also, are you using the 64-bit VMD on the IRIX machine, or just the 32-bit
> version?

Hi. Thanks for responding.

Unix/IRIX: (32-bit version)
When I use the command

membrane -l POPE -x 100 -y 100 -o file

it works fine (well, it just did in my test anyway). However, when trying

membrane -l POPE -x 1000 -y 1000 -o test

it got to segment W100 and then I got:

duplicate segment key W100
ERROR: failed on segment
MOLECULE DESTROYED BY FATAL ERROR! Use resetpsf to start over.

Linux/SuSE 9.1
Same results. With grid 100 x 100 I get a file, but with grid 1000 x 1000 I
get that same error.

Is there a problem making larger bilayers?

Robert W

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