VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Apr 19 2005 - 16:45:19 CDT

Hi,
  Have a look at the "draw arrow" example script in the VMD User's Guide:
http://www.ks.uiuc.edu/Research/vmd/vmd-1.8.3/ug/node112.html#ug:ui:text:draw

  John Stone
  vmd_at_ks.uiuc.edu

On Tue, Apr 19, 2005 at 03:02:57PM +0200, David Poger wrote:
> Hi
> When one does a normal mode analysis, one often uses a representation
> with arrows to show the atom/domains displacement (eg: Tama & Brooks
> III, JMB (2005), 344, 299-314 and Valadié et al, JMB (2003), 332,
> 657-674). How can I do this with VMD? does anyone have a ready-to-use
> script? I use CHARMM.
> Thanks a lot
>
> David 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078