VMD-L Mailing List

From: YOLANDA SMALL (yas102_at_psu.edu)
Date: Thu Jan 27 2005 - 18:41:27 CST

Hello,

I have a series of pdb files which I obtained by converting a trajectory file to
pdb frames.
Is there a VMD script somewhere that measures the hbonds between certain atoms
in each frame and outputs the frequency of hbonds as a function of time?

Thanks,
Y Small