VMD-L Mailing List

From: Eric Peterson (eric_at_caltech.edu)
Date: Fri Nov 12 2004 - 20:20:28 CST

I'm having some difficulty running the wsphere.tcl script included in the
NAMD tutorials that puts a sphere of water around ubiquitin... The script
gets to the point where it calls

solvate $psf $pdb -o $box -minmax $minmax

Which goes fine until solvate gets to this point:

reading structure from psf file
/Users/atomicpirate/Documents/Caltech/Research/bin/UIUC/VMD/VMD
1.8.1.app/Contents/vmd/plugins/noarch/tcl/solvate1.2/wat.psf

Segmentation fault

Anyone else had this problem before?

Eric

Powerbook G4 1.25 GHz, Mac OS 10.3.6
VMD 1.8.1