VMD-L Mailing List

From: Scott Pendley (scott.pendley_at_gmail.com)
Date: Tue Sep 28 2004 - 12:18:11 CDT

Hello all,

I was wondering if any of you could tell me the algorithm by which VMD
calculated whether a given residue is an alpha helix. Does it use the
phi/psi angles? If it does, what is the area that is compares them
against to determine helicity? Any help would be appreciated.

Sincerely,

Scott