From: Ashar Malik (
Date: Fri Oct 22 2021 - 21:34:47 CDT

Quick question(s).

What is the size of your system. Measure this by opening up the original
system in VMD, from which you start your simulation, and measuring using
the min max command or manually.

In the MD Config file what is the size of the system.

Do these two sizes match up?

On Sat, 23 Oct 2021 at 4:38 AM, Ryan Woltz <> wrote:

> Dear Community,
> From other posts I know this problem has been addressed a few times
> for the protein, but when I solve the protein issue I find other problems--00000000000048549805cefbf993--