From: Jason Smith (
Date: Thu Aug 12 2021 - 10:47:28 CDT

Is it just for visualisation purposes? VMD has draw functions.

Note that line doesn't behave well with being pretty sometimes. A series of cylinders, cones, or spheres makes for some nice dashed line styles that interact nicely with materials and light-based graphics.



Jason Smith
Post-Doctoral Fellow
Robert N. Young Lab, Simon Fraser University
8888 University Drive, Burnaby, BC, V5A-1S6

From: <> on behalf of Dawid das <>
Sent: Thursday, 12 August 2021 6:59:35 AM
Subject: vmd-l: Add specific h-bonds

Dear All,

I know how to visualize h-bonds using HBonds drawing method, however,
I would like to manually add an h-bond representation. Is it possible?
I tried using "Add/Remove bonds", but it "creates covalent bonds".

Best wishes,
Dawid Grabarek