From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Mon Jun 14 2021 - 10:55:13 CDT

apologies. I am responding to too many mailing list e-mails today and lost
track of the folder...

On Mon, Jun 14, 2021 at 11:54 AM MD Simulation <mdsimulationgroup_at_gmail.com>
wrote:

> Hey Axel,
>
> Thanks for the reply. Also, I did ask the question on the VMD mailing list
> 😁
>
> Cheers,
> Stacey
>
> On Mon, Jun 14, 2021, 11:52 AM Axel Kohlmeyer <akohlmey_at_gmail.com> wrote:
>
>> a) topotools is a *VMD* plugin, so you should ask your question on the
>> VMD mailing list, not a LAMMPS list
>> b) yes, topotools supports output to atom style sphere. It uses the
>> radius and (per-type) mass properties and converts them to diameter and
>> density
>>
>> On Mon, Jun 14, 2021 at 11:42 AM MD Simulation <
>> mdsimulationgroup_at_gmail.com> wrote:
>>
>>> Hello,
>>>
>>> Is there a setting for topotools to write the molecule information for
>>> the lammps style sphere?
>>>
>>> I would like an output file similar to the one here:
>>> https://urldefense.com/v3/__https://github.com/lammps/lammps/blob/master/examples/ASPHERE/box/data.box__;!!DZ3fjg!sBcuI4Yu8YvpVNanhPvp7HrDEqMm6oXH8TzdT2EgpDpgpNxJBNcEqbzD8A7CFJ5YjQ$
>>> <https://urldefense.com/v3/__https://github.com/lammps/lammps/blob/master/examples/ASPHERE/box/data.box__;!!DZ3fjg!uqDyRuC7edvJ4euZvBS1wg-O7Ix-hjaeX_LBQbG7M_s_Qx8kSlq6SvXEeVeYuAUjdA$>
>>>
>>> Thanks for the help,
>>> Stacey
>>>
>>
>>
>> --
>> Dr. Axel Kohlmeyer akohlmey_at_gmail.com https://urldefense.com/v3/__http://goo.gl/1wk0__;!!DZ3fjg!sBcuI4Yu8YvpVNanhPvp7HrDEqMm6oXH8TzdT2EgpDpgpNxJBNcEqbzD8A7hicAC_A$
>> College of Science & Technology, Temple University, Philadelphia PA, USA
>> International Centre for Theoretical Physics, Trieste. Italy.
>>
>

-- 
Dr. Axel Kohlmeyer  akohlmey_at_gmail.com  https://urldefense.com/v3/__http://goo.gl/1wk0__;!!DZ3fjg!sBcuI4Yu8YvpVNanhPvp7HrDEqMm6oXH8TzdT2EgpDpgpNxJBNcEqbzD8A7hicAC_A$ 
College of Science & Technology, Temple University, Philadelphia PA, USA
International Centre for Theoretical Physics, Trieste. Italy.