From: Axel Kohlmeyer (
Date: Mon Jun 14 2021 - 10:52:29 CDT

a) topotools is a *VMD* plugin, so you should ask your question on the VMD
mailing list, not a LAMMPS list
b) yes, topotools supports output to atom style sphere. It uses the radius
and (per-type) mass properties and converts them to diameter and density

On Mon, Jun 14, 2021 at 11:42 AM MD Simulation <>

> Hello,
> Is there a setting for topotools to write the molecule information for the
> lammps style sphere?
> I would like an output file similar to the one here:
> <;!!DZ3fjg!uqDyRuC7edvJ4euZvBS1wg-O7Ix-hjaeX_LBQbG7M_s_Qx8kSlq6SvXEeVeYuAUjdA$>
> Thanks for the help,
> Stacey

Dr. Axel Kohlmeyer;!!DZ3fjg!v1yCEzgNP8aUqxph9qJ-ZO6b7WX2NHocABztP2V608YysOlU8tAmOFvm6dBoG2PU7A$ 
College of Science & Technology, Temple University, Philadelphia PA, USA
International Centre for Theoretical Physics, Trieste. Italy.