From: Raman Preet Singh (
Date: Thu Nov 19 2020 - 08:35:23 CST

Dear All,

I did a fairly long simulation in Gromacs. The trajectory has 100,000 frames. Loading of all frames takes several minutes and the waiting time can be annoying. When I look at RMSD using RMSD Tool while the frames are still loading, it shows RMSD of only those frames which have been loaded till that time.

Is there a way to avoid the wait and calculate the RMSD of all frames?