VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Aug 10 2004 - 13:03:22 CDT
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Vani,
You can do all of the same operations you'd do in a normal VMD session
when running VMD in text mode with 'vmd -dispdev text'. You can write
new trajectory files with the "animate write" set of commands, which are
documented in the User's Guide. If you want NO console whatsoever, then
you'll want to run VMD redirecting I/O to/from files, and using the
'-eofexit' option such as:
vmd -dispdev text -eofexit < input.tcl > output.log
If you need more help, let us know.
John Stone
vmd_at_ks.uiuc.edu
On Tue, Aug 10, 2004 at 09:46:12AM -0700, Vani Krishna wrote:
> Hi:
>
> if i need to change something in each frame and write
> back a new dcd in batch mode, how do i do that?
>
> will 'writepdb'/'writedcd' work in this case? how do i
> tell VMD to write a new dcd after reading in an old
> one? (in batch mode, i don't want to open VMD console)
>
> Thanks
>
>
>
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-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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