VMD-L Mailing List

From: Bassam Haddad (bhaddad_at_pdx.edu)
Date: Tue Feb 26 2019 - 16:30:29 CST

I actually just tried it, made a cool movie following an ion through a
channel.

On Tue, Feb 26, 2019 at 2:25 PM Bassam Haddad <bhaddad_at_pdx.edu> wrote:

> You could align all of the frames to that atom. Then center you camera on
> the atom and it will be stationary relative to the rest of the
> simulation...I'm sure this isnt the best way to do so, but it could work.
>
> On Tue, Feb 26, 2019 at 2:23 PM Nick Palmer <tuf90798_at_temple.edu> wrote:
>
>> Hello everyone,
>>
>> I was wondering if it is possible to center an atom, or perhaps a residue
>> over the full course of a trajectory. I have been centering atoms with
>> center in the options under mouse, but it centers the at the atoms current
>> location, but then doesn't move with the simulation. I apologize if this
>> has been covered before or is very simple, but I haven't been able to find
>> anything I'm looking for.
>>
>> Thank you in advance.
>>
>>
>> --
>> Nicholas J. Palmer
>>
>