VMD-L Mailing List

From: Vermaas, Joshua (Joshua.Vermaas_at_nrel.gov)
Date: Tue Dec 04 2018 - 11:42:01 CST

This is a Tcl error that may be caused by your timezone not being set, at least from a perusal of google of the errors that crop up from ConvertLocalToUTC. Have you been messing with your system clock? See http://tcl.2662.n7.nabble.com/tcl-Bugs-1995175-clock-scan-problems-on-windows-td27789.html among other google results, but this isn't an issue with VMD per se, but something having to do with Tcl configuration.

-Josh

On 2018-12-03 20:48:10-07:00 owner-vmd-l_at_ks.uiuc.edu wrote:

Hello,
I wanted to analyse the Hbond interactions in my MD run using VMD but I keep getting this error:
time value too large/small to represent
time value too large/small to represent
    while executing
"ConvertLocalToUTC $date[set date {}] $TZData($timezone) 2361222"
    (procedure "FreeScan" line 84)
    invoked from within
"FreeScan $string $base $timezone $locale"
    (procedure "::tcl::clock::scan" line 70)
    invoked from within
"clock scan now"
    (procedure "::hbonds::hbonds" line 325)
    invoked from within
"::hbonds::hbonds -gui 1 -dist $::hbonds::guiDist -ang $::hbonds::guiAng -writefile $::hbonds::guiWrite -outdir $::hbonds::guiOutdir -frames $::hbonds:..."
    invoked from within
".hbonds.control.button invoke"
    ("uplevel" body line 1)
    invoked from within
"uplevel #0 [list $w invoke]"
    (procedure "tk::ButtonUp" line 22)
    invoked from within
"tk::ButtonUp .hbonds.control.button"
    (command bound to event)
I did MD for a complex consisting of mTOR and a 200 residue protein in solvent and NaCl ions for 10 ns.
Hope you can help. Thank you.
Regards,
Stephani