VMD-L Mailing List

From: Richard Wood (Richard.Wood_at_purduecal.edu)
Date: Mon Jul 06 2015 - 19:52:11 CDT

Hi all,

I have a simulation that has run for 337000 steps, but, unfortunately, has crashed. 337 steps have been written to a dcd file. The resultant dcd file is too large to read into VMD (the program crashes after reading in about 250 frames or so). Is there any workaround for me to get the last structure so I can start my simulation again? All I have is the starting geometry, the psf and the dcd file (no other restart files). Surely there is something I can read this file into.

TIA,
Richard