VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Apr 01 2004 - 10:40:51 CST

Hi,
  If you've actually modified the atom coordinates (and not just changed
the viewing orientation), then you either click on the molecule of interest
in the main VMD window and use the File->Save Coordinates menu item to
save the molecule to a new file, or you can use '$sel writeXXX' or
'animate write' to do this via text commands.

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Apr 01, 2004 at 11:42:44AM +0800, li wrote:
> Hi,all:
> A very simple question.I need align two molecules in VMD, then save the two molecule coordinates in another PDB file ,but failed in finding out this command in the VMD manual.
> thank in advance
> --
> USTC Alumni Email System
>
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078