VMD-L Mailing List

From: Maxim Belkin (mbelkin_at_ks.uiuc.edu)
Date: Wed Jan 22 2014 - 15:00:53 CST

Sorry, “addfile” on the second line should be one word.

On Jan 22, 2014, at 2:55 PM, Maxim Belkin <mbelkin_at_ks.uiuc.edu> wrote:

> That should work just fine. Try something like this:
>
> mol new {your_psf_file.psf} type {psf} first 0 last -1 step 1 waitfor 1
> mol add file {your_dcd_file.dcd} type {dcd} first 5000 last -1 step 1 waitfor -1 top
>
>
>
> On Jan 22, 2014, at 2:21 PM, Subbarao Kanchi <ksubbu85_at_gmail.com> wrote:
>
>> Hi Maxim Belkin,
>> vmd -dispdev text (to open vmd in text mode ) and the following commands were run in vmd terminal of vmd text mode.
>>
>> mol new .psf type psf
>> mol addfile .dcd type dcd first 5000 last -1 step 1
>> I source same commands by writing in a .tcl file (script.tcl) and source script.tcl in vmd terminal of vmd text mode. it yields the error "invalid command name "last"
>>
>>
>>
>> Regards,
>> Subbarao Kanchi.
>>
>>
>>
>>
>> On Thu, Jan 23, 2014 at 1:32 AM, Maxim Belkin <mbelkin_at_ks.uiuc.edu> wrote:
>> Hi Subbarao,
>>
>> How exactly do you call your script?
>>
>> Maxim
>>
>> On Jan 22, 2014, at 1:29 PM, Subbarao Kanchi <ksubbu85_at_gmail.com> wrote:
>>
>>> Dear All,
>>> I am using VMD in test mode (vmd -dispdev text ). I run the following commands in vmd command prompt and are working good. But I write same commands in a script.tcl and script is sourced in command prompt, it gives an error "invalid command name "last"". I will appreciate any suggestion to over come this problem.
>>>
>>> mol new .psf type psf
>>> mol addfile .dcd type dcd first 5000 last -1 step 1
>>>
>>>
>>>
>>> Thanks and regards,
>>> Subbarao Kanchi.
>>>
>>
>>
>