From: Ali Alizadeh (
Date: Thu Sep 05 2013 - 11:36:54 CDT

Dear All users,

I want to add a gap between my surface and molecular environment. Are ther
any options in vmd

for performing this? Or Can I add a gap wherever in my simulation box? I
want to omit the

interactions between them, my surface(crystal) and molecules.

Ali Alizadeh