VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Sun Aug 04 2013 - 23:11:02 CDT

On Mon, Aug 5, 2013 at 1:51 AM, Jim <jim.jim.strong_at_gmail.com> wrote:
> I have a structure and a CCP4 electron density map, which is loaded as an
> Isosurface in VMD. The map is huge, while my structure is just a small
> portion of the map. I cannot figure out how to display only a small portion
> of the map around a certain selection of atoms of my structure.

> Is this possible? I'm using VMD 1.9.1.

how about using clipping planes?

http://www.ks.uiuc.edu/Research/vmd/plugins/cliptool/

axel

> Thanks. 

-- 
Dr. Axel Kohlmeyer  akohlmey_at_gmail.com  http://goo.gl/1wk0
International Centre for Theoretical Physics, Trieste. Italy.