VMD-L Mailing List

From: Hovakim Grabski (grabski_at_escience.am)
Date: Sat Jun 29 2013 - 05:47:02 CDT

Dear Vmd users,
I ran a simulation between Hypericin and a DNA molecule.
Now I'm trying to visualize H-Bonds,but the problem is it shows there's
one between Guanine's Carbon and Hypericin H atom?
Representation settings for H-Bonds: all not water, distance-cutoff =
3.5 and Angle-cutoff = 30
Isn't that wrong?
What can I do?
Thanks in advance.
Hovakim