VMD-L Mailing List

From: Bharath K. Srikanth (s.bharath_at_iitg.ernet.in)
Date: Fri Mar 01 2013 - 03:05:58 CST

Hi all,

I'm trying to calculate the radial pair distribution function of a protein
with respect to a lipid bilayer. Could you please inform me whether the
values on the x-axis (of the graph obtained from the vmd script gofr) are
absolute distance (in nm), or some other form of normalized distance? If
it is absolute distance, I need to try again, because my graph's values
are incorrect.

Sincerely 

-- 
Bharath K Srikanth
IV Year B.Tech
Dept. of Chemical Engineering
Indian Institute of Technology, Guwahati
Ph: (+91) 88762 03224
E.mail: s.bharath_at_iitg.ernet.in