VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Nov 14 2003 - 14:45:33 CST

Albert,
  Are you loading anything besides just the .trr file? If not, this may
explain why you're not getting radii etc. VMD needs more than just the .trr
in order to get useful atom names, radii, etc.

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Nov 14, 2003 at 11:06:34AM -0800, Albert Sun wrote:
>
> subscribe vmd-l
> Posting messages to VMD-L
>
> Dear Sir / Madam,
>
> I am using VMD to view .trr files from Gromacs, and found that all atoms appear in the same radius.
>
> I don't know if can change the radius of some atoms when view the atoms from VMD.
>
> Appreciate you can advise me.
>
> Many Thanks,
>
> Albert
>
>
>
>
>
>
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-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
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