VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Oct 31 2003 - 12:37:52 CST

Brian,
  Updating the selection doesn't cause VMD to update secondary structure
via STRIDE, so that doesn't actually do what he's asking for. We don't have
a GUI for doing what the 'sscache' script does yet, but probably will in a
subsequent version of VMD.

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Oct 31, 2003 at 08:12:40AM -0800, Brian Bennion wrote:
> In the graphical representations box under the trajectory tab, you can
> turn on "update selection every frame" button and that should work.
>
> Brian
>
> On Fri, 31 Oct 2003, Jérôme Hénin wrote:
>
> > Hi all,
> >
> > How can I tell VMD to recalculate (using STRIDE) the secondary structure of a
> > protein for every frame of a trajectory?
> >
> > Thanks
> >
>
> --
> *****************************************************************
> **Brian Bennion, Ph.D. **
> **Computational and Systems Biology Division **
> **Biology and Biotechnology Research Program **
> **Lawrence Livermore National Laboratory **
> **P.O. Box 808, L-448 bennion1_at_llnl.gov **
> **7000 East Avenue phone: (925) 422-5722 **
> **Livermore, CA 94550 fax: (925) 422-6605 **
> *****************************************************************
> 

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