VMD-L Mailing List

From: Rudesh Toofanny (paxrdt_at_nottingham.ac.uk)
Date: Tue Oct 28 2003 - 10:32:51 CST

Hi,

I want to monitor the distances between two sets of atoms in a protein during the course of a trajectory (.dcd file), is there a way to do this? I know you can do a similar thing with 'measure contacts' for single frames or a pdb file.

Many thanks,

Rudesh

________________________________________
Rudesh Toofanny
EPSRC PhD Student
Laboratory of Biophysics and Surface Analysis
Computational Modelling and Informatics Group
The Boots Science Building
School of Pharmacy
University of Nottingham NG7 2RD
tel: +44 (0)115 8466272
fax: +44 (0)115 9615110
http://www.nottingham.ac.uk/lbsa