VMD-L Mailing List

From: skolev_at_mnet.bg
Date: Fri Mar 02 2012 - 09:33:07 CST

Dear VMD users/developers

I am performing a molecular dynamics of metal ions in water solution, but
I do not know how to plot the coordination number of a single ion (the
number of water molecules, or oxygen atoms, bonded to the ion within a
distance cutoff) versus time. How could this be done using VMD?

Thank you in advance.
Stefan Kolev, PhD student in the university of Sofia.

-----------------------------------------
Интернет от MSAT Cable
http://www.msatcable.bg