VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Mon Sep 26 2011 - 07:04:11 CDT

On Sep 26, 2011, at 7:52 AM, matziast_at_med.uth.gr wrote:

> Hi,
> I would like to convert many .coor from equilibration to pdb and I use the
> following script but it does't run.
> mol load psf mypsf.psf
> mol addfile eq_LNZ.coor
> set sel [atomselect top all]
> writepdb eq.pdb

You need

$sel writepdb eq.pdb

writepdb by itself is a special command of the psfgen plugin only.

Axel

>
> Can anyone help me?
> Thank you in advance.