From: Nima Nouri (nouri.f.nima_at_gmail.com)
Date: Fri Aug 12 2011 - 02:20:23 CDT

Hi Hamzeh

I think VMD it self does not have a prepared function for MSF but with
having a readable trajectory of your simulation by VMD you can simply write
it in a few line using the tcl script.

On Fri, Aug 12, 2011 at 11:02 AM, hamze rahimi <buksanbio_at_gmail.com> wrote:

> Dear expert
>
> i want calculate rmsf after MD run. vmd may be help me?
> best wishes
>

-- 
Best Regards
N.Nouri
Ph.D Student
Department of Mechanical Engineering
Isfahan University of Technology
Isfahan, Iran