From: Saurav Goel (goel19x1_at_gmail.com)
Date: Sun May 01 2011 - 19:43:28 CDT

Hi,

I have one question regarding VMD.

I want to calculate surface roughness on top of workpiece which has been
machined using a tool comprising of silicon atoms and has been imported from
LAMMPS.
I guess, RMSD tool of VMD will be able to do it. If that's correct, I was
just wondering what should I select in the RMSD window to do it.

Thanks.

Regards,
Saurav