VMD-L Mailing List
From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Sun Dec 19 2010 - 13:59:02 CST
- Next message: Ajasja LjubetiÄ: "Re: selection of amino acids with certain distance each others"
- Previous message: leila karami: "selection of amino acids with certain distance each others"
- In reply to: leila karami: "selection of amino acids with certain distance each others"
- Next in thread: Francesco Oteri: "Re: selection of amino acids with certain distance each others"
- Reply: Francesco Oteri: "Re: selection of amino acids with certain distance each others"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
On Sun, Dec 19, 2010 at 2:00 PM, leila karami <karami.leila1_at_gmail.com> wrote:
> Dear VMD users
>
> I opened a protein (containing 40 amino acids) by VMD. I want to know
> what amino acids of protein are put in 1.5 angstrom within amino acid
> number 17.
...and i want a pony for christmas. ;)
you have two options
1) read the VMD user's guide and understand how atom selections
work and then use them to get this information.
2) use your knowledge of chemistry and typical bond lengths and atom
distances in organic molecules to answer this question directly
without using VMD.
once you have done either one, you can sit back and realize
that it is not a very good idea to ask a question on public mailing
list to people that volunteer others to help without giving any
indication that you have made some attempts to solve the
problem yourself.
axel.
ps.: thanks for providing such a great opportunity revive
a very old - but timely - joke.
-- Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0 Institute for Computational Molecular Science Temple University, Philadelphia PA, USA.
- Next message: Ajasja LjubetiÄ: "Re: selection of amino acids with certain distance each others"
- Previous message: leila karami: "selection of amino acids with certain distance each others"
- In reply to: leila karami: "selection of amino acids with certain distance each others"
- Next in thread: Francesco Oteri: "Re: selection of amino acids with certain distance each others"
- Reply: Francesco Oteri: "Re: selection of amino acids with certain distance each others"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]