From: leila karami (karami.leila1_at_gmail.com)
Date: Mon Jul 05 2010 - 08:33:23 CDT

Hi VMD users

I have a pdb file containing 2 chains,A : protein and B: DNA. I did
simulation of interaction of pr-dna interaction.
Can I obtain Contact map plot of protein–DNA interactions using VMD ?

how?

any help will highly appreciated.