VMD-L Mailing List

From: Daniel Farrell (dwf_at_asu.edu)
Date: Tue Jun 15 2010 - 12:16:58 CDT

I have multiple PDB snapshots of the same protein, the only difference
being in the xyz coordinates of each snapshot. One of these snapshots
causes a segmentation fault. The last line that VMD reports is
"Determining bond structure from distance search ..." and then
"Segmentation fault". I get the problem in Linux VMD and in Windows
VMD, and I have emailed these a friend using Linux who also saw the
same error. Interestingly, another friend using Mac VMD did not
observe the error. I tried attaching the PDB file to this email, but
the email did not post to the list, so now I'm trying without
attaching the PDB file.

Thanks for any help!

Dan Farrell