VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri May 30 2003 - 16:04:54 CDT

Hi,
  Charles Schwieters sent this note about rotating dihedrals in VMD-XPLOR,
but it bounced due to the anti-spam measures in place on VMD-L,
so I'm forwarding it for others to read:

----- Forwarded message from owner-vmd-l_at_ks.uiuc.edu -----

To: vmd-l_at_ks.uiuc.edu
From: Charles_at_Schwieters.org
Subject: Re: Rotating dihedrals
CC: Charles_at_Schwieters.org
In-Reply-To: Your message of "Fri, 30 May 2003 15:16:18 CDT."
             <20030530151614.C2674_at_moline.ks.uiuc.edu>
Date: Fri, 30 May 2003 16:57:15 -0400

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>
>
> On Fri, May 30, 2003 at 12:09:43PM +0200, Patrick Ladam wrote:
> > Hi all,
> > I want to rotate a serie of dihedral angles in a DNA molecule and
> > then save the new coordinates.
> > I see no tool to graphically manipulate dihedral angles in VMD
> > and I wonder how I can do that, is there any script available for that?
>
>
> John Stone <johns_at_ks.uiuc.edu> wrote:
>
> If anyone has other suggestions I haven't thought of, please chime in,
> I'm swamped today so I may not have thought of all of the possibilities.

vmd-xplor (http://vmd-xplor.cit.nih.gov/)
has a gui which has this functionality. However, the included version
of VMD lags well behind current development.

Charles
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