VMD-L Mailing List

From: Deepangi Pandit (dnp5_at_njit.edu)
Date: Thu Jan 21 2010 - 09:13:45 CST

Hi Bernhard:
I am not 100% sure but are you looking for something as below. Please
be sure to readme.txt for details.

Usage

source _sasa_res.tcl
getAllResSASA "protein" <radius> <framestart fameend>

http://lubos.vrbka.net/?s=sasa

http://www.lubos.vrbka.net/download/vmd/_sasa_res.txt

THX
DP

On Thu, Jan 21, 2010 at 3:32 AM, Bernhard Knapp
<bernhard.knapp_at_meduniwien.ac.at> wrote:
> Hi everyone,
>
> does anyone know which build-in SASA calculation functions are used in VMD
> (in the source it is called via "measure sasa")?
> I would need the proper citation for it but unfortunatly I couldn't find a
> hint for it in the VMD paper.
>
> cheers
> Bernhard
>
>
>
>