VMD-L Mailing List

From: Irene Newhouse (einew_at_hotmail.com)
Date: Tue Jan 19 2010 - 13:31:08 CST

I've been running APBS locally. When I have the results displayed with the top molecule, I see nothing. Displaying in a new window works. I've been trying to follow http://apbs.wustl.edu/MediaWiki/index.php/How_do_I_visualize_the_electrostatic_potential_around_my_biomolecule%3F#Isocontour_visualization? to map the potential to the molecular surface, and I can't get it to work. I can see isosurfaces w/out difficulty, as well as field lines, but I can't display the surface & color by volume. That website dates from an earlier version of VMD. Is there something slightly different in 1.8.7 that I'm not aware of?

 

Thanks!

 

Irene Newhouse
                                               
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