VMD-L Mailing List

From: snoze pa (snoze.pa_at_gmail.com)
Date: Wed Dec 23 2009 - 14:44:45 CST

Dear VMD users,

 I am trying to delete all the water molecule around my molecule to
see how many donor and acceptors bonds are present in the molecule.
When I am using the command "not water", then it hides the water
molecules but still show the hydrogen bonds with water in Hbonds
drawing method. How can i avoid extra H bonds from water molecule. I
am using a dcd and psf file in this.

Thank you and happy holidays

s