VMD-L Mailing List

From: Peter Freddolino (petefred_at_ks.uiuc.edu)
Date: Thu Apr 02 2009 - 09:27:02 CDT

There's an Hbonds drawing method in the Graphical Representations menu
which should do what you want.
Best,
Peter

Bernhard Knapp wrote:
> Hi everyone
>
> Is there an option in vmd to automatically draw hydrogen-bonds between
> certain selected amino acids? I could only find the mouse->add/remove
> bonds menu where you have to do it manually. If this is not directly
> implemented is there an extension which can to that because until now I
> am computing the hbs in gromacs and then I add them via mouse to my
> graphics...
>
> cheers
> Bernhard