VMD-L Mailing List
From: Alexander A. Vakhrushev (makaveli.lcf_at_gmail.com)
Date: Tue Sep 30 2008 - 09:24:43 CDT
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Try
$vmd -dispdev text -e your_tcl_script
2008/9/30, Rudra Banerjee <bnrj.rudra_at_yahoo.com>:
> no no.....i am sorry that i was not clear enough!!
> what i meant is if there is any way to solvate water molecule from terminal:
> something like
> $vmd -dispdev text <some command>
>
>
> --
>
> Rudra
> JRF; SNBNCBS
> http://www.bose.res.in/~rudra
>
> A bus station is where a bus stops. A train station is where a train
> stops. On my desk I have a work station.
>
> Please, if possible, don't send me MS Word or PowerPoint attachments
> Why?See: http://www.gnu.org/philosophy/no-word-attachments.html
>
>
>
>
>
> ----- Original Message ----
> From: Alexander A. Vakhrushev <makaveli.lcf_at_gmail.com>
> To: Rudra Banerjee <bnrj.rudra_at_yahoo.com>
> Sent: Tuesday, 30 September, 2008 3:25:13 PM
> Subject: Re: vmd-l: water box
>
> Hi Rudra!
>
> Use tcl command 'solvate <args>' in VMD console.
>
> 2008/9/30 Rudra Banerjee <bnrj.rudra_at_yahoo.com>:
> > dear friends,
> > how can i 'solvate' a molecule in a waterbox from commad line? i am linux user
> >
> >
> > --
> > Rudra
> > JRF; SNBNCBS
> > http://www.bose.res.in/~rudra
> >
> > A bus station is where a bus stops. A train station is where a train
> > stops. On my desk I have a work station.
> >
> > Please, if possible, don't send me MS Word or PowerPoint attachments
> > Why?See: http://www.gnu.org/philosophy/no-word-attachments.html
> >
> >
> > Add more friends to your messenger and enjoy! Go to http://messenger.yahoo.com/invite/
> >
> >
> >
>
>
>
> --
> Best regards,
>
> Dr. Alexander Vakhrushev
> Institute of Applied Mechanics
> Dep. of Mech. and Phys.-Chem.
> of heterogeneous media
> UB of Russian Academy of Sciences
> 34 T. Baramzinoy St.
> Izhevsk, Russia 426067
> ----------------------------------
> С уважением,
> Вахрушев Александр Александрович
>
> к.ф.-м.н., с.н.с.
> Институт прикладной механики
> Уральского Отделения
> Российской Академии Наук
> 426067, г. Ижевск
> ул. Т. Барамзиной 34
> +7(3412)21-45-83
>
>
>
>
> Get perfect Email ID for your Resume. Grab now http://in.promos.yahoo.com/address
>
>
-- Best regards, Dr. Alexander Vakhrushev Institute of Applied Mechanics Dep. of Mech. and Phys.-Chem. of heterogeneous media UB of Russian Academy of Sciences 34 T. Baramzinoy St. Izhevsk, Russia 426067 ---------------------------------- С уважением, Вахрушев Александр Александрович к.ф.-м.н., с.н.с. Институт прикладной механики Уральского Отделения Российской Академии Наук 426067, г. Ижевск ул. Т. Барамзиной 34 +7(3412)21-45-83
- Next message: Rudra Banerjee: "atom type"
- Previous message: Rudra Banerjee: "water box"
- Maybe in reply to: John Stone: "Re: water box"
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