VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Sat Sep 20 2008 - 02:20:34 CDT

Hi,
  Questions about NAMD simulations are best directed to the NAMD-L
mailing list.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Sep 19, 2008 at 05:47:12PM +0530, Anirban Ghosh wrote:
>
>
> Hi ALL,
>
> I want to restart a simulation with appropriate restart files. I am using the restart.vel file, so I am not specifying the temperature again. Since I am also using the .xsc file to restart, so I am not giving the Periodic Boundary Condition again. Should I give the Langevin parameters and the PME parameters in the configuration file for restarting? Any suggestion is welcome.
>
> Regards,
>
>
>
> Anirban Ghosh
> M.Tech Bioinformatics
> University of Hyderabad
>
>
>
> Add more friends to your messenger and enjoy! Go to http://in.messenger.yahoo.com/invite/ 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
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