VMD-L Mailing List

From: Chang, Christopher (Christopher_Chang_at_nrel.gov)
Date: Fri Aug 29 2008 - 13:01:04 CDT

Hi,

   Trying to compile VMD 1.8.6 on dual quad-core Xeon Mac, OSX 10.5.4, with
gcc 4.3.1, and the Python and numpy installation that is installed with the
OS (Python 2.5.1, built with GCC 4.0.1).

VMD configure options are

MACOSXX86 FLTKOPENGL FLTK TK ACTC CUDA CONTRIB TCL PYTHON PTHREADS NUMPY GCC

as per John Stone's message on 5/1/07, without IMD, SPACEBALL, TACHYON, and
NETCDF support.

Any ideas if the following is arising from a mismatch between GCC 4.0.1 with
which the installed Python was built, and GCC 4.3.1 which I am trying to
use?

Thanks, Chris

echo "Compiling " py_atomsel.C " --> " py_atomsel.o " ..."; \
    c++ -fPIC -Os -ffast-math -DARCH_MACOSXX86 -DVMDOPENGL -DVMDFLTKOPENGL
-DVMDGRAPHICS -DVMDACTC -DVMDCUDA -DVMDCONTRIB -DVMDPYTHON -DVMDTHREADS
-DUSEPOSIXTHREADS -D_REENTRANT -DVMDNUMPY -DVMDSURF -DVMDMSMS
-DVMDFIELDLINES -DVMDVOLUMETEXTURE -DVMDTCL -DVMDTK -DVMDSTATICPLUGINS
-DVMDGUI -DVMDFLTK -I../lib/actc/include -F/System/Library/Frameworks
-I../lib/tcl/include
-I../lib/tk/lib_MACOSXX86/Tk.framework/Versions/8.4/Headers
-I../plugins/include -I../plugins/MACOSXX86/molfile -I../lib/fltk/fltk-1.1.7
-I. -I/Users/cchang/include/fltk -c py_atomsel.C -o
../MACOSXX86/py_atomsel.o
Compiling py_atomsel.C --> py_atomsel.o ...
py_atomsel.C: In function ŒPyObject* sasa(PyAtomSelObject*, PyObject*,
PyObject*)¹:
py_atomsel.C:863: warning: deprecated conversion from string constant to
Œchar*¹
py_atomsel.C:863: warning: deprecated conversion from string constant to
Œchar*¹
py_atomsel.C:863: warning: deprecated conversion from string constant to
Œchar*¹
py_atomsel.C:863: warning: deprecated conversion from string constant to
Œchar*¹
py_atomsel.C: At global scope:
py_atomsel.C:941: error: invalid conversion from Œint (*)(PyObject*)¹ to
ŒPy_ssize_t (*)(PyObject*)¹
make: *** [py_atomsel.o] Error 1