From: Rabab Toubar (
Date: Sun Jun 08 2008 - 09:36:00 CDT

Dear Sirs,
I generated the psf file of a circular protein manually using VMD. On visualization, I noticed that the protein is no longer circular (open at one end), and some of the bonds are not connected. Is there a way to do this right, especially when I noticed that from the archives it is tricky using VMD with circular proteins.