VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Feb 05 2008 - 09:45:23 CST
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Hi,
If you can load an XTC trajectory into VMD, I would expect that the
cluster plugin could use it. The bigger question is the other programs
can read your XTC file. If not, you could use VMD or CatDCD to convert
your trajectory to a form that they can work with. If you have questions
about the plugin, please contact Luis Gracia (lug2002_at_med.cornell.edu).
Cheers,
John Stone
vmd_at_ks.uiuc.edu
On Tue, Feb 05, 2008 at 05:05:00PM +0200, OZGE ENGIN wrote:
> Hi all,
>
> I visited the Cluster VMD plugin webpage. I could not understand that it accepts input file types from NMRcluster, Xcluster or R?
>
> Consequently, as John said 'it does not care what care what file the trajectory come from.'
>
> It means that there is possibility of loading the .xtc files (trajectory files obtained from gromos force-field) to this plugin?
>
> Thanks in advance
>
> ozge
>
> Ozge Engin
> =================================
> Computational Science & Engineering
> Koc University
-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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- In reply to: OZGE ENGIN: "About Cluster Plug-in"
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