VMD-L Mailing List

From: Sergey Mkrtchyan (sergeyvmd_at_gmail.com)
Date: Wed Jan 16 2008 - 11:48:16 CST

Hey guys!

All I want to do is simply visualize the polymer chain, say I have 100
monomers with x, y, z for each and I want to give a radius of 1 to each of
them. I don't really care what type they are, I just need a "spheres at the
corrdinates".

I tried PDB format something like this...

ATOM 1 N UNK 1 47.92091 65.22737 21.88935
ATOM 2 N UNK 2 48.78523 65.71315 21.75909
ATOM 3 N UNK 3 49.62076 65.48353 21.25993
ATOM 4 N UNK 4 50.13233 64.65174 21.47537

... but it does not display that properly.

Isn't there a way to do this? I've done tonns of google-ing, nothing really
helpful.

Thanks a lot.

Sergey 

-- 
Sergey Mkrtchyan,
PhD Student @
Department of Physics & Astronomy,
Faculty of Science, University of Waterloo