VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Nov 07 2007 - 20:17:54 CST

Hi,
  Can you try running it on filenames/directories that don't contain spaces,
I suspect that's the source of the problem. I'll have to look at that
plugin and see if the author made a mistake with filename handling there.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Nov 07, 2007 at 08:10:12PM +0200, Anatoliy wrote:
> Hi everybody,
>
> I was trying to add some ions using grafical interface for VMD's Autoionize plugin. But insted of output I have got message like this:
>
>
> while executing
> "error """
> (procedure "autoionize_usage" line 18)
> invoked from within
> "autoionize_usage"
> (procedure "autoionize_core" line 19)
> invoked from within
> "autoionize_core -psf C:/Program Files/University of Illinois/VMD/tut/argrs_wb.psf -pdb C:/Program Files/University of Illinois/VMD/tut/argrs_wb.pdb -o..."
> ("eval" body line 1)
> invoked from within
> "eval autoionize_core $args "
> invoked from within
> "if $errflag { error $errMsg $savedInfo $savedCode }"
> (procedure "autoionize" line 8)
> invoked from within
> "autoionize -psf C:/Program Files/University of Illinois/VMD/tut/argrs_wb.psf -pdb C:/Program Files/University of Illinois/VMD/tut/argrs_wb.pdb -o ioni..."
> ("eval" body line 1)
> invoked from within
> "eval autoionize $command_line"
> (procedure "::Autoi::run_autoi" line 70)
> invoked from within
> "::Autoi::run_autoi"
> invoked from within
> ".autoigui.autoi invoke"
> ("uplevel" body line 1)
> invoked from within
> "uplevel #0 [list $w invoke]"
> (procedure "tk::ButtonUp" line 24)
> invoked from within
> "tk::ButtonUp .autoigui.autoi
> "
> (command bound to event)
>
> Would anybody so kind to explain what does it mean and why I didn't succeed in my ionisation?
> sincerely yours,
> Anatoliy 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078