VMD-L Mailing List

From: Naresh (naresh_at_MIT.EDU)
Date: Fri Aug 10 2007 - 14:13:42 CDT

Hi all,

   Is there a way to color a protein based on a property value I
calculate (through CHARMM) for each residue. I have both time
averaged and instantaneous values of this property which varies from
residue to residue along the sequence. I would like to look at this
property on the protein structure in one of the representations (such
as cartoon), either the averaged value or instantaneous one with
simulation.

Thanks,
-Naresh