VMD-L Mailing List

From: Sanjeev B.S. (sanjeev_at_mbu.iisc.ernet.in)
Date: Mon Jan 07 2002 - 02:43:18 CST

Hello,
        Can anyone help me with the following problems please?

1) RMSD/Align
   After loading the PDBs if I want to superpose them, I get the error:
 
Error: atomselect: cannot parse selection text:

   But if I play rmsd.tcl, it does align!

2) Is there a way so that I can compute particular properties (like bond
length/angles/dihedrals) using script and write the output to a file?

I use VMD 1.7.1 on Linux.

Thanks very much for any help,

Sincerely,
-Sanjeev